Tools
NameVersionDescription
Alien Hunter1.1.0Predict putative Horizontal Gene Transfer (HGT) events.
CRISPR/Cas Finder1.1.0Find CRISPR arrays and their associated Cas proteins.
mobileOG-db1.1.0Find mobile genetic elements (MGEs).
Proksee Assemble1.1.0Assemble sequencing reads with Proksee Assemble.
VirSorter1.1.0Detect dsDNA and ssDNA virus genomes (phage).
GC Skew1.0.0Add a GC Skew plot.
pLannotate1.1.0Annotate engineered plasmids with pLannotate. Only works with sequences less than 50,000 bp.
Plots1.0.0Upload plot data from a text file.
GC Content1.0.0Add a GC Content plot.
FastANI1.1.0Fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI).
eggNOG Mapper0.1.0Find functional annotations for the selected sequences using eggNOG-mapper.
Prokka1.1.0Annotate the genome sequence with Prokka.
ORFs1.0.0Find Open Reading Frames (ORFs)
CGView Builder1.1.0Builds the initial CGView JSON file from a GenBank, EMBL, FASTA or raw sequence.
BLAST1.1.0Perform a BLAST comparision with another genome sequence.
Features1.0.0Upload feature data from a text file.
CARD Resistance Gene Identifier1.1.0The Comprehensive Antibiotic Resistance Database (CARD) Resistance Gene Identifier (RGI)