| Alien Hunter | 1.1.0 | Predict putative Horizontal Gene Transfer (HGT) events. |
| CRISPR/Cas Finder | 1.1.0 | Find CRISPR arrays and their associated Cas proteins. |
| mobileOG-db | 1.1.0 | Find mobile genetic elements (MGEs). |
| Proksee Assemble | 1.1.0 | Assemble sequencing reads with Proksee Assemble. |
| VirSorter | 1.1.0 | Detect dsDNA and ssDNA virus genomes (phage). |
| GC Skew | 1.0.0 | Add a GC Skew plot. |
| pLannotate | 1.1.0 | Annotate engineered plasmids with pLannotate. Only works with sequences less than 50,000 bp. |
| Plots | 1.0.0 | Upload plot data from a text file. |
| GC Content | 1.0.0 | Add a GC Content plot. |
| FastANI | 1.1.0 | Fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI). |
| eggNOG Mapper | 0.1.0 | Find functional annotations for the selected sequences using eggNOG-mapper. |
| Prokka | 1.1.0 | Annotate the genome sequence with Prokka. |
| ORFs | 1.0.0 | Find Open Reading Frames (ORFs) |
| CGView Builder | 1.1.0 | Builds the initial CGView JSON file from a GenBank, EMBL, FASTA or raw sequence. |
| BLAST | 1.1.0 | Perform a BLAST comparision with another genome sequence. |
| Features | 1.0.0 | Upload feature data from a text file. |
| CARD Resistance Gene Identifier | 1.1.0 | The Comprehensive Antibiotic Resistance Database (CARD) Resistance Gene Identifier (RGI) |