Tools : BLAST
Public IDblast
Short NameBLAST
Version1.4.1
DescriptionPerform a BLAST comparision with another genome sequence.
SoftwareBLAST+ 2.15.0
CitationAltschul, S.F., Gish, W., Miller, W., Myers, E.W. & Lipman, D.J. (1990) "Basic local alignment search tool." J. Mol. Biol. 215:403-410.
CategorySequence Comparison
Added ByJason R. Grant
Workerserver
Queuemedium
Created At2022-01-25 21:00:54 UTC
Updated At2024-11-21 18:15:16 UTC
Change Log
-------------------------------------------------------------------------------- Prokan Tool Changelog: BLAST -------------------------------------------------------------------------------- v1.4.1 - 2024-11-21 - Fix fasta file symlink issue with docker v1.4.0 - 2024-11-20 - Upgrade BLAST to 2.15.0 - Use docker instead of conda v1.3.3 - 2024-11-08 - Improve CDS extraction (include pseudo genes) - CDS and ORFs more consistent with Sequence Selector (Download -> Sequence) - Add comparison help v1.3.3 - 2024-11-01 - Changed: enclosed hits of equal score are now skipped - Fixed: CDS translations for features with multiple locations or a translation property v1.3.2 - 2024-10-25 - Fix resetting dialog when changen file or query v1.3.1 - 2023-10-19 - Add genetic code numbers to select list v1.3.0 - 2023-10-02 - Removed: ability to do tblastx (Translated DNA vs Translated DNA). It's too slow. - Changed: e-value cutoff from 0.1 to 0.0001 v1.2.0 - 2023-09-15 - Added: Ability to skip added hits that are enclosed by higher scoring hits v1.1.6 - 2023-09-11 - Improved: Set track drawOrder to 'score' v1.1.5 - 2023-08-31 - Use job name as default for track/legend names v1.1.4 - 2023-06-21 - Fixed: Blast results missing CDS position details because feature name had spaces. This caused the fasta id from being parsed correctly - Added: Warning if fasta id position syntax can not be parsed. v1.1.3 - 2023-02-19 - Changed: by default no longer separate results by strand v1.1.2 - 2023-01-27 - Fixed: filetype detection - Improved: Remove non word characters from raw sequences v1.1.1 - 2023-01-13 - Fix bit score: integer to float - Change meta data key: score -> bit_score v1.1.0 - 2022-11-24 - Add ReportCard v1.0.1 - 2022-03-30 - blastn results are now strand specific v1.0.0 - 2022-01-20 - Upgrade BLAST to 2.12.0 v0.1.0 - 2021-02-14 - Initial Release