Tools : Map Builder | |
---|---|
Public ID | cgview_builder |
Short Name | Builder |
Version | 2.0.5 |
Description | Builds the initial CGView JSON file from a GenBank, EMBL, FASTA or raw sequence. |
Software | CGParse 1.0.5 |
Citation | Not Published Yet |
Category | |
Added By | Jason R. Grant |
Worker | server |
Queue | small |
Created At | 2022-01-25 21:00:54 UTC |
Updated At | 2024-11-01 19:33:03 UTC |
Change Log
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Prokan Tool Changelog: CGView Builder (CGParse)
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v2.0.5 - 2024-11-01
- DNA vs Protein check: include N with DNA
- Fix translation check for -1 strand features with locations
v2.0.4 - 2024-10-22
- Replace dashes and periods in sequences with N's
- Fixes issues with Crispr, Mitos, pLannotate and bakta
v2.0.3 - 2024-10-16
- Remove console.log in CGParse
v2.0.2 - 2024-10-15
- Fix contig names from FASTA files (Only use upto first whitespace)
v2.0.1 - 2024-10-08
- Remove '-' and '*' from contig names
- Use only up to the first whitespace for contig names
- Add Features by Type to Report Card
- Add Log warning to Report Card
v2.0.0 - 2024-09-26
- Complete codebase rewrite for enhanced performance and maintainability (CGParse)
- Increased speed as parsing is done on the client and not the server
- Works with features that span muliple locations (complex features)
- New Settings to customize name generation and include/exclude feature types and qualifiers
v1.1.6 - 2023-12-05
- Remove problematic encoded characters from contig names
v1.1.5 - 2023-11-27
- Empty qualifiers are ignored for name creation
v1.1.4 - 2023-10-16
- For contig names, replace ';' with '_'
v1.1.3 - 2023-08-30
- Add product and db_xref as fallbacks for feature names
v1.1.2 - 2023-03-24
- For contig names, replace '|' with '_'
v1.1.1 - 2023-03-16
- Remove single quotes from project names
v1.1.0 - 2022-11-24
- Add ReportCard
v1.0.1 - 2022-10-27
- Fixed raw sequences
v1.0.0 - 2022-01-20
- Bump version for Proksee release
v0.2.0 - 2021-09-29
- Update CGViewBuilder to 1.1.0
v0.1.0 - 2021-02-14
- Initial Release